Quality Control: Standardize Methods
To reduce uncertainty and variability in fluorescence measurement, standard protocols/procedures should be used. Factors to control include:
- Dark adaption duration
- Optic fiber distance and angle (portable fluorometers with exposed optic fiber)
- Light settings for steady state fluorescence within a certain range
- Fluorometer max and min fluorescence sensitivity
- Time of the day (in the field for plants, in the field or lab for algae)
- When working with plants, choose plants randomly in the population and examine 3 leaves in each plant
- Measure leaves with comparable pigment composition; avoid senescing leaves
- Reference point: dark adapted, non stressed (would not expect any heat dissipation, but if present it would affect Fm); in the field, measured as predawn Fm
- Abiotic variables when working in the field (e.g., air temperature, relative humidity, light intensity)
Image source: http://www.licor.com/env/products/photosynthesis/chambers/6400-40.html